Rbcl gene functional study

rbcL of - pnas.org

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been accumulated for angiosperms, only a few rbcL se-quences have been reported for ferns (3), because of the difficulty of finding appropriate primers to amplify or se-quence the gene. Ferns include muchmore ancient groups than angiosperms (19), and their nucleotide sequences are diversified amongfern groups. 'In this study ...

rbcL of - pnas.org

A comparative computational study of the ‘rbcL’ gene in ...

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A comparative computational study of the ‘rbcL’ gene in plants and in the three prokaryotic families—Archaea, cyanobacteria and proteobacteria ... (rbcL, MW ≈ 56,000) and eight small subunits (rbcS, MW ≈ 14,000), assembling into an ... patterns may shed light on functional/structural features governing Rubisco activity.

A comparative computational study of the ‘rbcL’ gene in ...

WikiGenes - rbcL - RuBisCO large subunit

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The noncoding DNA region of the chloroplast genome, flanked by the genes rbcL and psaI (ORF36), has been sequenced for seven species of the grass family . A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family .

WikiGenes - rbcL - RuBisCO large subunit

Cloning, Sequencing and Phylogenetic Study of rbcL Gene ...

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Vo1.10 N0.1 Mar.20I Cloning,Sequencing and Phylogenetic Study of rbcL Gene from Cyanobacteria Arthrospira and Spirulina① Hu Jinjie(刘金姐),Zhang XuechengQ ,Sui Zhenghong,Mao ...

Cloning, Sequencing and Phylogenetic Study of rbcL Gene ...

RuBisCO - Wikipedia

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The large-chain gene (rbcL) is encoded by the chloroplast DNA in plants. There are typically several related small-chain genes in the nucleus of plant cells, and the small chains are imported to the stromal compartment of chloroplasts from the cytosol by crossing the outer chloroplast membrane.

RuBisCO - Wikipedia

Molecular evolution of rbcL in three gymnosperm families ...

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Results. We used the timescale and phylogenetic analyses to investigate and search for processes of adaptive evolution in rbcL gene in three gymnosperm families, namely Podocarpaceae, Taxaceae and Cephalotaxaceae.To understand the relationships between regions identified as having evolved under adaptive evolution, we performed coevolutionary analyses using the software CAPS.

Molecular evolution of rbcL in three gymnosperm families ...

Molecular evolution of rbcL in three gymnosperm families ...

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6/3/2011 · Conclusions. The gene rbcL has experienced bursts of adaptations in response to the changing concentration of CO 2 in the atmosphere. These adaptations have emerged as a result of a continuous dynamic of mutations, many of which may have …

Molecular evolution of rbcL in three gymnosperm families ...

ACCase and rbcL gene expression as a function of nutrient ...

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9/15/2017 · The rbcL gene encodes the catalytic large ... Ca and EDTA) on the growth physiology and expression of selected functional genes (rbcL and accD) in Chlorella sorokiniana at different phases of its cultivation and to develop an integrated strategy for achieving high lipid productivity. Furthermore, the effect of combined stress on the biochemical ...

ACCase and rbcL gene expression as a function of nutrient ...

(PDF) A comparative computational study of the ‘rbcL’ gene ...

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PDF | On Jan 10, 2013, Sunil Mondal and others published A comparative computational study of the ‘rbcL’ gene in plants and in the three prokaryotic families—Archaea, cyanobacteria and ...

(PDF) A comparative computational study of the ‘rbcL’ gene ...

Identification of Rubisco rbcL and rbcS in Camellia ...

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The rbcL gene is highly conserved, while rbcS is less conserved (Manzara and Gruissem, 1988). Recent molecular phylogenetic analysis, however, revealed that positive selection in the rbcL gene of terrestrial land plants is quite a common phenomenon (Kapralov and Filatov, 2007; Galmes et al., 2014).

Identification of Rubisco rbcL and rbcS in Camellia ...

Isolating rbcL gene and promoter of bell pepper (Capsicum ...

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Isolating rbcL gene and promoter of bell pepper (Capsicum annuum L.) and its sequence analysis using bioinformatic tools Meysam Samiee, Bahram Baghban Kohnehrouz * Department of Plant Breeding and Biotechnology, Faculty of Agriculture, University of Tabriz, Iran …

Isolating rbcL gene and promoter of bell pepper (Capsicum ...

Application of rbcL based molecular diversity analysis to ...

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Additionally, rbcL mRNA levels can be used to measure carbon fixation activity, enabling the coupling of diversity studies with functional characterizations using the same gene (John et al., 2007). In this paper we specifically focus on diversity analysis and apply it to the study of algae in the final clarifier or denitrification filter ...

Application of rbcL based molecular diversity analysis to ...

A comprehensive framework for functional diversity ...

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Marine chromophytes are taxonomically diverse group of algae and contribute approximately half of the total oceanic primary production. To understand the global patterns of functional diversity of chromophytic phytoplankton, robust bioinformatics and statistical analyses including deep phylogeny based on 2476 form ID rbcL gene sequences representing seven ecologically significant oceanographic ...

A comprehensive framework for functional diversity ...

Community analysis of aquatic periphyton using the rbcL gene

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Abstract Previous studies have designed primers for regions of the rbcL gene for use in whole-community analyses of phytoplankton. The purpose of this study was to determine if the rbcL gene can be used to assess the biodiversity of green algae and cyanobacteria in two aliquots of an environmental sample of periphyton. Each of the aliquots had a genotype richness of seven, and the most common ...

Community analysis of aquatic periphyton using the rbcL gene

ACCase and rbcL gene expression as a function of nutrient ...

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In present study, at mid log complex is also necessary to maintain stability of chloroplast and phase combined nutrient, metal and EDTA stress conditions stroma as it required for photophosphorylation for ATP production (OCMS+OE) resulted in 5.15-fold increase in the level of rbcL gene [13,40,41].

ACCase and rbcL gene expression as a function of nutrient ...

effect of relaxed functional constraints on the ...

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The photosynthetic gene rbcL has been lost or dramatically altered in some lineages of nonphotosynthetic parasitic plants, but the dynamics of these events following loss of photosynthesis and whether rbcL has sustained functionally significant changes in …

effect of relaxed functional constraints on the ...

DNA Barcoding: Amplification and sequence analysis of rbcl ...

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Methods: In this study, we amplified and sequenced the chloroplast DNA regions (matk+rbcl) of Solanum nigrum, Euphorbia helioscopia and Dalbergia sissoo to study the functional annotation, homology modeling and sequence analysis to allow a more efficient utilization of …

DNA Barcoding: Amplification and sequence analysis of rbcl ...

Widespread positive selection in the photosynthetic ...

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5/11/2007 · Rubisco enzyme catalyzes the first step in net photosynthetic CO2 assimilation and photorespiratory carbon oxidation and is responsible for almost all carbon fixation on Earth. The large subunit of Rubisco is encoded by the chloroplast rbcL gene, which is widely used for reconstruction of plant phylogenies due to its conservative nature. Plant systematicists have mainly used rbcL paying …

Widespread positive selection in the photosynthetic ...

ycf1, the most promising plastid DNA barcode of land ...

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2/12/2015 · The rbcL gene was suggested as a core barcode not as a result of its ... The ycf1 gene is functional and is not ... This study was partly supported by grants from the Ministry of Science and ...

ycf1, the most promising plastid DNA barcode of land ...

MOLECULAR DIVERSITY OF MARINE PHYTOPLANKTON …

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The phylogeny and diversity of two key functional genes were investigated as the basis for improved ... rbcL, LSU of the RUBISCO gene Diatoms are an important component of the mar-ine contribution to global primary production (Nelson et al. 1995, Field et al. 1998). ... study sites represent two different kinds of nitrate (NO 3)) ...

MOLECULAR DIVERSITY OF MARINE PHYTOPLANKTON …

Homology Modelling of Conserved rbcl Amino Acid Sequences ...

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means to perform functional and structural annotation of hypothetical proteins. Structures are more evolutionary conserved than sequence; therefore, analysis of three-dimensional (3D) structures holds great potential. Our present study describes the three 3D models of rbcL protein sequences which found conserved in multiple sequence

Homology Modelling of Conserved rbcl Amino Acid Sequences ...
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